Monovalent mannose-based DC-SIGN antagonists: targeting the hydrophobic groove of the receptor

Eur J Med Chem. 2014 Mar 21:75:308-26. doi: 10.1016/j.ejmech.2014.01.047. Epub 2014 Jan 31.

Abstract

Dendritic cell-specific, intercellular adhesion molecule-3-grabbing non-integrin (DC-SIGN) is a C-type lectin expressed specifically on dendritic cells. It is a primary site for recognition and binding of various pathogens and thus a promising therapeutic target for inhibition of pathogen entry and subsequent prevention of immune defense cell infection. We report the design and synthesis of d-mannose-based DC-SIGN antagonists bearing diaryl substituted 1,3-diaminopropanol or glycerol moieties incorporated to target the hydrophobic groove of the receptor. The designed glycomimetics were evaluated by in vitro assay of the isolated DC-SIGN extracellular domain for their ability to compete with HIV-1 gp120 for binding to the DC-SIGN carbohydrate recognition domain. Compounds 14d and 14e, that display IC50 values of 40 μM and 50 μM, are among the most potent monovalent DC-SIGN antagonists reported. The antagonistic effect of all the synthesized compounds was further evaluated by a one-point in vitro assay that measures DC adhesion. Compounds 14d, 14e, 18d and 18e were shown to act as functional antagonists of DC-SIGN-mediated DC adhesion. The binding mode of 14d was also studied by molecular docking and molecular dynamics simulation, which revealed flexibility of 14d in the binding site and provides a basis for further optimization.

Keywords: Anti-infectives; Carbohydrates; DC-SIGN; DC-SIGN antagonists; Glycomimetics; Lectins.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Binding Sites
  • Cell Adhesion Molecules / antagonists & inhibitors*
  • Cell Adhesion Molecules / chemistry
  • Cell Adhesion Molecules / metabolism*
  • Dendritic Cells / drug effects
  • Dendritic Cells / metabolism
  • HIV Envelope Protein gp120 / metabolism*
  • HIV Infections / drug therapy
  • HIV Infections / metabolism
  • HIV Infections / virology
  • HIV-1 / physiology*
  • Host-Pathogen Interactions / drug effects*
  • Humans
  • Lectins, C-Type / antagonists & inhibitors*
  • Lectins, C-Type / chemistry
  • Lectins, C-Type / metabolism*
  • Mannose / analogs & derivatives*
  • Mannose / pharmacology*
  • Molecular Docking Simulation
  • Receptors, Cell Surface / antagonists & inhibitors*
  • Receptors, Cell Surface / chemistry
  • Receptors, Cell Surface / metabolism*

Substances

  • Cell Adhesion Molecules
  • DC-specific ICAM-3 grabbing nonintegrin
  • HIV Envelope Protein gp120
  • Lectins, C-Type
  • Receptors, Cell Surface
  • Mannose